Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 AL136317.3-201ENST00000618497 906 ntBASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA9Q9Y5G4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AL355312.1-201ENST00000407115 2176 ntBASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AL596257.1-201ENST00000641463 2694 ntBASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AC068418.2-201ENST00000577309 3703 ntBASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 PMS2P4-201ENST00000412466 1052 ntBASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AL512356.2-201ENST00000546955 174 ntBASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AL138688.1-201ENST00000624851 1594 ntBASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA9Q9Y5G4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 MST1L-201ENST00000442552 2185 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AL592309.1-201ENST00000443127 649 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AC069335.1-201ENST00000489972 472 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 KRT8P48-201ENST00000515599 1220 ntBASIC15.72■□□□□ 0.11
PCDHGA9Q9Y5G4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms