Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 AC011467.2-201ENST00000598425 242 ntBASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 AC103702.1-201ENST00000548801 2630 ntBASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 TSPY26P-202ENST00000565928 3884 ntBASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 AK4P3-201ENST00000418260 669 ntBASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 NUS1P1-201ENST00000446295 882 ntBASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 AL139011.1-202ENST00000642063 584 ntBASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 AL596087.1-201ENST00000400979 1969 ntBASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D4Q9Y2X8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms