Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 AC005225.4-201ENST00000557330 545 ntBASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 AC009118.2-201ENST00000613275 655 ntBASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.24■□□□□ 0.83
LEMD3Q9Y2U8 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 PCDHB17P-201ENST00000539533 2393 ntBASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 RN7SL828P-201ENST00000607615 303 ntBASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 AL035252.4-201ENST00000624174 288 ntBASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LEMD3Q9Y2U8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 AC005034.1-201ENST00000426657 489 ntBASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 CRB3P1-201ENST00000449338 276 ntBASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 AC012645.4-201ENST00000610691 1061 ntBASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LEMD3Q9Y2U8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AC005332.8-201ENST00000622750 2735 ntBASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AC009477.1-201ENST00000452936 217 ntBASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AP002490.2-201ENST00000524791 560 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms