Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.14■□□□□ 0.33
EBF1Q9UH73 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EBF1Q9UH73 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 FAM58DP-201ENST00000428076 619 ntBASIC17.13■□□□□ 0.33
EBF1Q9UH73 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 KLF2P3-201ENST00000451977 1087 ntBASIC17.13■□□□□ 0.33
EBF1Q9UH73 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 AL135744.1-201ENST00000565098 629 ntBASIC17.13■□□□□ 0.33
EBF1Q9UH73 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 AF228730.6-201ENST00000641497 218 ntBASIC17.13■□□□□ 0.33
EBF1Q9UH73 AC084121.3-201ENST00000641716 218 ntBASIC17.13■□□□□ 0.33
EBF1Q9UH73 AC105233.6-201ENST00000642093 218 ntBASIC17.13■□□□□ 0.33
EBF1Q9UH73 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
EBF1Q9UH73 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EBF1Q9UH73 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 GPS2P2-201ENST00000430745 888 ntBASIC17.12■□□□□ 0.33
EBF1Q9UH73 SLC25A6P5-201ENST00000435663 894 ntBASIC17.12■□□□□ 0.33
EBF1Q9UH73 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.12■□□□□ 0.33
EBF1Q9UH73 LINC00304-203ENST00000565008 1864 ntBASIC17.12■□□□□ 0.33
EBF1Q9UH73 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EBF1Q9UH73 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 LYSMD4-203ENST00000378904 2122 ntBASIC17.11■□□□□ 0.33
EBF1Q9UH73 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 MIR943-201ENST00000401286 94 ntBASIC17.11■□□□□ 0.33
EBF1Q9UH73 AC015922.1-201ENST00000421102 1152 ntBASIC17.11■□□□□ 0.33
EBF1Q9UH73 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms