Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AKAP8P1-201ENST00000434743 1349 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 LINC00896-202ENST00000609602 2128 ntBASIC15.41■□□□□ 0.06
LRFN1Q9P244 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 AL592309.1-201ENST00000443127 649 ntBASIC15.41■□□□□ 0.06
LRFN1Q9P244 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 AC079140.1-201ENST00000508039 487 ntBASIC15.41■□□□□ 0.06
LRFN1Q9P244 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 AL031055.1-201ENST00000606362 631 ntBASIC15.41■□□□□ 0.06
LRFN1Q9P244 AC093028.1-201ENST00000622998 982 ntBASIC15.41■□□□□ 0.06
LRFN1Q9P244 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.41■□□□□ 0.06
LRFN1Q9P244 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRFN1Q9P244 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AL139400.1-201ENST00000366220 510 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 RNU1-129P-201ENST00000384064 167 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AL627223.1-201ENST00000416693 442 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 AC092474.2-201ENST00000424288 719 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 CYMP-203ENST00000474680 1263 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AC124947.2-201ENST00000547118 1133 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 U1.21-201ENST00000580816 167 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AC106028.4-201ENST00000614509 607 ntBASIC15.4■□□□□ 0.06
LRFN1Q9P244 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRFN1Q9P244 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRFN1Q9P244 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms