Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 ECEL1P3-201ENST00000427961 737 ntBASIC16.34■□□□□ 0.21
NDE1Q9NXR1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 RASA4DP-201ENST00000460726 1199 ntBASIC16.34■□□□□ 0.21
NDE1Q9NXR1 AC122714.2-201ENST00000502787 707 ntBASIC16.34■□□□□ 0.21
NDE1Q9NXR1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NDE1Q9NXR1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 INGX-201ENST00000359239 846 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 CD99P1-205ENST00000527459 561 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 AC142381.4-202ENST00000563973 229 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 STK25P1-201ENST00000585406 838 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 ITM2C-210ENST00000620962 501 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 AL135999.2-201ENST00000622438 1686 ntBASIC16.33■□□□□ 0.2
NDE1Q9NXR1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDE1Q9NXR1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.32■□□□□ 0.2
NDE1Q9NXR1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms