Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC136632.2-201ENST00000512891 861 ntBASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 IGHV3-22-201ENST00000520721 359 ntBASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 BX640515.1-201ENST00000617215 977 ntBASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NECTIN3Q9NQS3 GPR89P-201ENST00000407924 1495 ntBASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 SLC25A1P1-201ENST00000528351 927 ntBASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NECTIN3Q9NQS3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AP000347.1-202ENST00000435868 847 ntBASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 RNA5SP415-201ENST00000517246 115 ntBASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AC005593.1-201ENST00000624894 515 ntBASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms