Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 AC005363.2-201ENST00000618631 242 ntBASIC16.7■□□□□ 0.26
SSU72Q9NP77 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 KRT8P26-201ENST00000534154 1276 ntBASIC16.69■□□□□ 0.26
SSU72Q9NP77 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 TMEM191A-211ENST00000637163 1067 ntBASIC16.69■□□□□ 0.26
SSU72Q9NP77 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 LINC01144-201ENST00000626198 1710 ntBASIC16.69■□□□□ 0.26
SSU72Q9NP77 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSU72Q9NP77 LINC02447-202ENST00000501888 2146 ntBASIC16.69■□□□□ 0.26
SSU72Q9NP77 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSU72Q9NP77 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 AC092647.4-201ENST00000457211 535 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 AC091607.1-201ENST00000490318 1060 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 MIR4492-201ENST00000581627 80 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 AC011498.5-201ENST00000592027 486 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 AC073592.4-201ENST00000623827 446 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 AL590326.2-201ENST00000625139 305 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.68■□□□□ 0.26
SSU72Q9NP77 AL590787.1-201ENST00000568856 1315 ntBASIC16.68■□□□□ 0.26
SSU72Q9NP77 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSU72Q9NP77 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.67■□□□□ 0.26
SSU72Q9NP77 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSU72Q9NP77 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.67■□□□□ 0.26
SSU72Q9NP77 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.67■□□□□ 0.26
SSU72Q9NP77 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSU72Q9NP77 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
SSU72Q9NP77 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms