Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.37■□□□□ 0.05
CHD8Q9HCK8 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 AP003419.4-201ENST00000616071 517 ntBASIC15.36■□□□□ 0.05
CHD8Q9HCK8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 SPDYE17-201ENST00000412399 783 ntBASIC15.36■□□□□ 0.05
CHD8Q9HCK8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.36■□□□□ 0.05
CHD8Q9HCK8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.36■□□□□ 0.05
CHD8Q9HCK8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 AC069218.1-201ENST00000435269 762 ntBASIC15.35■□□□□ 0.05
CHD8Q9HCK8 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.35■□□□□ 0.05
CHD8Q9HCK8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 KRT90P-201ENST00000549264 1064 ntBASIC15.35■□□□□ 0.05
CHD8Q9HCK8 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 AC135776.1-201ENST00000319817 2481 ntBASIC15.35■□□□□ 0.05
CHD8Q9HCK8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.35■□□□□ 0.05
CHD8Q9HCK8 RPL13AP19-201ENST00000434320 584 ntBASIC15.35■□□□□ 0.05
CHD8Q9HCK8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.35■□□□□ 0.05
CHD8Q9HCK8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC134698.3-201ENST00000523880 214 ntBASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC079336.7-201ENST00000623428 1078 ntBASIC15.34■□□□□ 0.05
CHD8Q9HCK8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 ACTG1P3-201ENST00000431775 1114 ntBASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 MIR4492-201ENST00000581627 80 ntBASIC15.34■□□□□ 0.05
CHD8Q9HCK8 MIR4750-201ENST00000584564 56 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms