Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 CROCCP1-201ENST00000426910 5675 ntBASIC15.6■□□□□ 0.09
UBQLN3Q9H347 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 MIR940-201ENST00000401276 94 ntBASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AC007967.2-201ENST00000432613 625 ntBASIC15.6■□□□□ 0.09
UBQLN3Q9H347 VN2R19P-201ENST00000442399 1052 ntBASIC15.6■□□□□ 0.09
UBQLN3Q9H347 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AC064836.3-201ENST00000607928 673 ntBASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AC010654.1-201ENST00000615722 808 ntBASIC15.6■□□□□ 0.09
UBQLN3Q9H347 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UBQLN3Q9H347 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 DOC2GP-204ENST00000639052 2548 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 HCG4B-203ENST00000450128 991 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 PAWRP1-201ENST00000451083 565 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 RNA5SP416-201ENST00000516838 111 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 OR7E47P-204ENST00000575924 449 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 MIR4751-201ENST00000578027 74 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 PCDH8P1-201ENST00000428983 2773 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 PI4KAP1-204ENST00000612579 1703 ntBASIC15.59■□□□□ 0.09
UBQLN3Q9H347 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UBQLN3Q9H347 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
UBQLN3Q9H347 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
UBQLN3Q9H347 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
UBQLN3Q9H347 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
UBQLN3Q9H347 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.58■□□□□ 0.09
UBQLN3Q9H347 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.58■□□□□ 0.08
UBQLN3Q9H347 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms