Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
FOXP3Q9BZS1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.39■□□□□ 0.38
FOXP3Q9BZS1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FOXP3Q9BZS1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FOXP3Q9BZS1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXP3Q9BZS1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXP3Q9BZS1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 AC007950.2-201ENST00000615045 2347 ntBASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 CICP6-201ENST00000457191 2729 ntBASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 LINC02199-201ENST00000506655 2702 ntBASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 MIR574-201ENST00000385209 96 ntBASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXP3Q9BZS1 PMS2P1-201ENST00000431037 1228 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms