Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 AL356309.3-201ENST00000624132 1934 ntBASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 AL512652.2-201ENST00000625156 1716 ntBASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 MTHFR-217ENST00000641820 1569 ntBASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PACSIN1Q9BY11 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 GGT3P-204ENST00000453783 1664 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 PAWRP1-201ENST00000451083 565 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SART3-203ENST00000546611 1184 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 MTDHP3-201ENST00000594186 672 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 AL139288.1-201ENST00000623748 933 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 TOP3BP1-201ENST00000420768 1380 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 AC022188.1-201ENST00000620960 1664 ntBASIC17.9■□□□□ 0.46
PACSIN1Q9BY11 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PACSIN1Q9BY11 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PACSIN1Q9BY11 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 ARMC10P1-201ENST00000313754 855 ntBASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 AL139011.1-202ENST00000642063 584 ntBASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.89■□□□□ 0.45
PACSIN1Q9BY11 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms