Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.94□□□□□ -0.02
VRK1Q99986 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VRK1Q99986 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.94□□□□□ -0.02
VRK1Q99986 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VRK1Q99986 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VRK1Q99986 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VRK1Q99986 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.94□□□□□ -0.02
VRK1Q99986 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VRK1Q99986 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VRK1Q99986 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
VRK1Q99986 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.93□□□□□ -0.02
VRK1Q99986 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 SPDYE21P-201ENST00000413323 827 ntBASIC14.93□□□□□ -0.02
VRK1Q99986 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.93□□□□□ -0.02
VRK1Q99986 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.93□□□□□ -0.02
VRK1Q99986 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.93□□□□□ -0.02
VRK1Q99986 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.93□□□□□ -0.02
VRK1Q99986 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 AC023511.2-201ENST00000618803 211 ntBASIC14.93□□□□□ -0.02
VRK1Q99986 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.93□□□□□ -0.02
VRK1Q99986 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VRK1Q99986 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
VRK1Q99986 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.92□□□□□ -0.02
VRK1Q99986 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.92□□□□□ -0.02
VRK1Q99986 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.92□□□□□ -0.02
VRK1Q99986 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 DDX43P3-201ENST00000441064 443 ntBASIC14.92□□□□□ -0.02
VRK1Q99986 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 AC117500.6-201ENST00000624871 588 ntBASIC14.92□□□□□ -0.02
VRK1Q99986 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 AP002414.3-201ENST00000589352 1468 ntBASIC14.92□□□□□ -0.02
VRK1Q99986 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VRK1Q99986 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 LINC00554-201ENST00000564841 3011 ntBASIC14.92□□□□□ -0.02
VRK1Q99986 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VRK1Q99986 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms