Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC106795.1-205ENST00000512851 1056 ntBASIC16.52■□□□□ 0.24
NPAS2Q99743 IGHV3-52-201ENST00000519770 353 ntBASIC16.52■□□□□ 0.24
NPAS2Q99743 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS2Q99743 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.52■□□□□ 0.24
NPAS2Q99743 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS2Q99743 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPAS2Q99743 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS2Q99743 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS2Q99743 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NPAS2Q99743 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.23
NPAS2Q99743 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.52■□□□□ 0.23
NPAS2Q99743 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.52■□□□□ 0.23
NPAS2Q99743 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS2Q99743 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 AC097374.2-201ENST00000618617 1306 ntBASIC16.51■□□□□ 0.23
NPAS2Q99743 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.51■□□□□ 0.23
NPAS2Q99743 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.51■□□□□ 0.23
NPAS2Q99743 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.51■□□□□ 0.23
NPAS2Q99743 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.51■□□□□ 0.23
NPAS2Q99743 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS2Q99743 ALOX12P2-203ENST00000570921 1945 ntBASIC16.51■□□□□ 0.23
NPAS2Q99743 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS2Q99743 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS2Q99743 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPAS2Q99743 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS2Q99743 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPAS2Q99743 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.5■□□□□ 0.23
NPAS2Q99743 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.5■□□□□ 0.23
NPAS2Q99743 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS2Q99743 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS2Q99743 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS2Q99743 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS2Q99743 AP001269.4-201ENST00000609611 512 ntBASIC16.5■□□□□ 0.23
NPAS2Q99743 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NPAS2Q99743 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NPAS2Q99743 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPAS2Q99743 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS2Q99743 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS2Q99743 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS2Q99743 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS2Q99743 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS2Q99743 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms