Protein–RNA interactions for Protein: Q99570

PIK3R4, Phosphoinositide 3-kinase regulatory subunit 4, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R4Q99570 IMPDH1P4-201ENST00000445028 1534 ntBASIC23.19■■□□□ 1.3
PIK3R4Q99570 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3R4Q99570 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3R4Q99570 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 AC012317.2-201ENST00000623305 2251 ntBASIC23.18■■□□□ 1.3
PIK3R4Q99570 NSL1-201ENST00000366976 722 ntTSL 2 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 AC024267.1-201ENST00000582320 895 ntBASIC23.18■■□□□ 1.3
PIK3R4Q99570 AC015936.2-201ENST00000593177 259 ntBASIC23.18■■□□□ 1.3
PIK3R4Q99570 AC008735.3-201ENST00000596646 500 ntBASIC23.18■■□□□ 1.3
PIK3R4Q99570 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3R4Q99570 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.18■■□□□ 1.3
PIK3R4Q99570 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 TUBB8P12-201ENST00000308911 1335 ntBASIC23.17■■□□□ 1.3
PIK3R4Q99570 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 DPM2-202ENST00000373110 738 ntTSL 2 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 TUBB7P-202ENST00000428444 1305 ntBASIC23.17■■□□□ 1.3
PIK3R4Q99570 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 TUBB8P7-204ENST00000567960 1332 ntBASIC23.17■■□□□ 1.3
PIK3R4Q99570 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 TMEM261P1-201ENST00000604899 340 ntBASIC23.17■■□□□ 1.3
PIK3R4Q99570 AC026979.3-201ENST00000607315 403 ntBASIC23.17■■□□□ 1.3
PIK3R4Q99570 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PIK3R4Q99570 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3R4Q99570 RPF1-202ENST00000370656 724 ntTSL 2 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 MPV17-208ENST00000405076 603 ntTSL 5 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 AC133552.6-201ENST00000613406 534 ntBASIC23.16■■□□□ 1.3
PIK3R4Q99570 WFDC1-204ENST00000613603 549 ntBASIC23.16■■□□□ 1.3
PIK3R4Q99570 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PIK3R4Q99570 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PIK3R4Q99570 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PIK3R4Q99570 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PIK3R4Q99570 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 ANKRD19P-201ENST00000338192 862 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 FAM86MP-201ENST00000340703 885 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 AC093724.1-201ENST00000448659 1027 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 AL589987.1-201ENST00000453380 819 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 MIR6775-201ENST00000617557 69 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 SNX33P1-201ENST00000592116 1762 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PIK3R4Q99570 AC006277.1-201ENST00000624348 1610 ntBASIC23.15■■□□□ 1.3
PIK3R4Q99570 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PIK3R4Q99570 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms