Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
CSPG4P5Q96PW8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG4P5Q96PW8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG4P5Q96PW8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG4P5Q96PW8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 HCG4B-203ENST00000450128 991 ntBASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSPG4P5Q96PW8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 CRYGEP-201ENST00000412192 528 ntBASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 AC145285.3-201ENST00000564603 959 ntBASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 AC012569.1-201ENST00000591191 1524 ntBASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 AC104109.2-201ENST00000602919 1418 ntBASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.3■□□□□ 0.36
CSPG4P5Q96PW8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 IL9RP2-201ENST00000423948 1312 ntBASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 AL031731.1-201ENST00000642131 2094 ntBASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 AC034105.1-201ENST00000563488 319 ntBASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
CSPG4P5Q96PW8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms