Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 AC008741.2-201ENST00000612792 3115 ntBASIC15.94■□□□□ 0.14
COL21A1Q96P44 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 AC139887.3-201ENST00000568585 713 ntBASIC15.94■□□□□ 0.14
COL21A1Q96P44 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL21A1Q96P44 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.93■□□□□ 0.14
COL21A1Q96P44 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 RPS2P28-201ENST00000314255 741 ntBASIC15.93■□□□□ 0.14
COL21A1Q96P44 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 LINC00982-205ENST00000420957 435 ntBASIC15.93■□□□□ 0.14
COL21A1Q96P44 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 OR7E14P-202ENST00000530490 1290 ntBASIC15.93■□□□□ 0.14
COL21A1Q96P44 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.93■□□□□ 0.14
COL21A1Q96P44 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL21A1Q96P44 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 PCDHB17P-201ENST00000539533 2393 ntBASIC15.92■□□□□ 0.14
COL21A1Q96P44 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL21A1Q96P44 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 LAGE3P1-201ENST00000425356 484 ntBASIC15.92■□□□□ 0.14
COL21A1Q96P44 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 RPS2P1-201ENST00000434010 821 ntBASIC15.92■□□□□ 0.14
COL21A1Q96P44 AC018712.1-201ENST00000455767 687 ntBASIC15.92■□□□□ 0.14
COL21A1Q96P44 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.92■□□□□ 0.14
COL21A1Q96P44 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.92■□□□□ 0.14
COL21A1Q96P44 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms