Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 ALG1L8P-201ENST00000533887 760 ntBASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 MIR6080-201ENST00000617359 66 ntBASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 AC008267.7-201ENST00000624570 1194 ntBASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC46A1Q96NT5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AC139713.2-201ENST00000641328 2723 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 WASH6P-202ENST00000359512 1437 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AP005018.1-201ENST00000525475 301 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AC027307.3-201ENST00000594262 1100 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 AL358472.5-202ENST00000641448 1267 ntBASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC46A1Q96NT5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 MIR346-201ENST00000362234 95 ntBASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 CRB3P1-201ENST00000449338 276 ntBASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 CR383656.12-201ENST00000549567 513 ntBASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC46A1Q96NT5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC46A1Q96NT5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms