Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 AC008894.3-201ENST00000624324 3103 ntBASIC13.68□□□□□ -0.22
ZNF48Q96MX3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 AC025678.2-201ENST00000562061 970 ntBASIC13.68□□□□□ -0.22
ZNF48Q96MX3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 AC012313.1-201ENST00000593393 3059 ntBASIC13.68□□□□□ -0.22
ZNF48Q96MX3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF48Q96MX3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 AC099398.1-201ENST00000567919 2776 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SPDYE11-202ENST00000450699 704 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SPDYE9P-201ENST00000570642 692 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 MIR4515-201ENST00000584082 81 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SPDYE10P-202ENST00000612005 668 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SPDYE8P-202ENST00000612377 668 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 AC009093.7-201ENST00000623853 1223 ntBASIC13.67□□□□□ -0.22
ZNF48Q96MX3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF48Q96MX3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms