Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX27Q96L92 AC093520.2-201ENST00000561830 333 ntBASIC18.08■□□□□ 0.48
SNX27Q96L92 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX27Q96L92 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX27Q96L92 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SNX27Q96L92 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SNX27Q96L92 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX27Q96L92 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 AL627223.1-201ENST00000416693 442 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.07■□□□□ 0.48
SNX27Q96L92 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 SPCS2P4-201ENST00000436160 681 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 AC023141.5-201ENST00000458585 616 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.07■□□□□ 0.48
SNX27Q96L92 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX27Q96L92 AP002490.2-201ENST00000524791 560 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX27Q96L92 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX27Q96L92 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SNX27Q96L92 AL391256.1-201ENST00000443260 1855 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 AL645728.1-201ENST00000366221 2101 ntBASIC18.07■□□□□ 0.48
SNX27Q96L92 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX27Q96L92 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.06■□□□□ 0.48
SNX27Q96L92 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.06■□□□□ 0.48
SNX27Q96L92 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.06■□□□□ 0.48
SNX27Q96L92 TSEN15P1-201ENST00000423257 515 ntBASIC18.06■□□□□ 0.48
SNX27Q96L92 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.06■□□□□ 0.48
SNX27Q96L92 AL592309.1-201ENST00000443127 649 ntBASIC18.06■□□□□ 0.48
SNX27Q96L92 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SNX27Q96L92 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNX27Q96L92 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNX27Q96L92 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX27Q96L92 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNX27Q96L92 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX27Q96L92 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX27Q96L92 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms