Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 PKD1P5-201ENST00000532415 10291 ntBASIC14.9□□□□□ -0.02
APH1AQ96BI3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 SLC22A20-204ENST00000530038 1673 ntBASIC14.9□□□□□ -0.02
APH1AQ96BI3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APH1AQ96BI3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 YBX2P1-201ENST00000394192 760 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 KRT18P13-201ENST00000400056 1290 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 MCCD1P2-201ENST00000423228 335 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 MIR3687-2-201ENST00000577708 61 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 AC068137.2-201ENST00000605408 478 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 MIR3687-1-201ENST00000614492 61 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 PCDHB17P-201ENST00000539533 2393 ntBASIC14.89□□□□□ -0.03
APH1AQ96BI3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APH1AQ96BI3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APH1AQ96BI3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 AC023511.2-201ENST00000618803 211 ntBASIC14.88□□□□□ -0.03
APH1AQ96BI3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms