Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TNFRSF25Q93038 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19■□□□□ 0.63
TNFRSF25Q93038 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19■□□□□ 0.63
TNFRSF25Q93038 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19■□□□□ 0.63
TNFRSF25Q93038 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 POLD2P1-201ENST00000511220 997 ntBASIC19■□□□□ 0.63
TNFRSF25Q93038 KRT18P58-201ENST00000527480 1120 ntBASIC19■□□□□ 0.63
TNFRSF25Q93038 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF25Q93038 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF25Q93038 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF25Q93038 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TNFRSF25Q93038 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF25Q93038 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF25Q93038 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 AC074386.1-202ENST00000463561 864 ntBASIC18.99■□□□□ 0.63
TNFRSF25Q93038 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 AC021097.1-201ENST00000607902 574 ntBASIC18.99■□□□□ 0.63
TNFRSF25Q93038 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 AL662844.4-201ENST00000606367 2838 ntBASIC18.99■□□□□ 0.63
TNFRSF25Q93038 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 PCGF3-213ENST00000620529 1899 ntBASIC18.99■□□□□ 0.63
TNFRSF25Q93038 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF25Q93038 AC092364.2-201ENST00000596710 2692 ntBASIC18.98■□□□□ 0.63
TNFRSF25Q93038 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 AC023274.1-201ENST00000418278 595 ntBASIC18.98■□□□□ 0.63
TNFRSF25Q93038 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 AC068137.2-201ENST00000605408 478 ntBASIC18.98■□□□□ 0.63
TNFRSF25Q93038 AC099522.2-201ENST00000607001 744 ntBASIC18.98■□□□□ 0.63
TNFRSF25Q93038 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.98■□□□□ 0.63
TNFRSF25Q93038 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF25Q93038 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF25Q93038 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms