Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRQ92834 AL132655.2-201ENST00000596276 594 ntBASIC20.56■□□□□ 0.88
RPGRQ92834 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.56■□□□□ 0.88
RPGRQ92834 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.56■□□□□ 0.88
RPGRQ92834 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.56■□□□□ 0.88
RPGRQ92834 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RPGRQ92834 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.56■□□□□ 0.88
RPGRQ92834 AC007541.1-201ENST00000570282 1469 ntBASIC20.56■□□□□ 0.88
RPGRQ92834 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRQ92834 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 AC008764.6-201ENST00000595909 2069 ntBASIC20.55■□□□□ 0.88
RPGRQ92834 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.55■□□□□ 0.88
RPGRQ92834 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RPGRQ92834 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.55■□□□□ 0.88
RPGRQ92834 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 AC098859.1-201ENST00000502915 1238 ntBASIC20.55■□□□□ 0.88
RPGRQ92834 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.55■□□□□ 0.88
RPGRQ92834 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 AC105021.1-202ENST00000570572 669 ntBASIC20.55■□□□□ 0.88
RPGRQ92834 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.55■□□□□ 0.88
RPGRQ92834 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.55■□□□□ 0.88
RPGRQ92834 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
RPGRQ92834 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRQ92834 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRQ92834 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.55■□□□□ 0.88
RPGRQ92834 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.55■□□□□ 0.88
RPGRQ92834 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RPGRQ92834 TUBB8P12-201ENST00000308911 1335 ntBASIC20.54■□□□□ 0.88
RPGRQ92834 TUBB7P-202ENST00000428444 1305 ntBASIC20.54■□□□□ 0.88
RPGRQ92834 TUBB8P7-204ENST00000567960 1332 ntBASIC20.54■□□□□ 0.88
RPGRQ92834 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RPGRQ92834 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RPGRQ92834 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRQ92834 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRQ92834 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRQ92834 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRQ92834 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRQ92834 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 TP53TG3HP-202ENST00000569755 579 ntBASIC20.54■□□□□ 0.88
RPGRQ92834 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.54■□□□□ 0.88
RPGRQ92834 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRQ92834 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.54■□□□□ 0.88
RPGRQ92834 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRQ92834 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRQ92834 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRQ92834 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RPGRQ92834 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RPGRQ92834 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.53■□□□□ 0.88
RPGRQ92834 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.53■□□□□ 0.88
RPGRQ92834 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.53■□□□□ 0.88
RPGRQ92834 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.53■□□□□ 0.88
RPGRQ92834 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.53■□□□□ 0.88
RPGRQ92834 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RPGRQ92834 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.53■□□□□ 0.88
RPGRQ92834 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RPGRQ92834 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.53■□□□□ 0.88
RPGRQ92834 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms