Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC092910.1-201ENST00000482027 1129 ntBASIC17.88■□□□□ 0.45
DDX1Q92499 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX1Q92499 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX1Q92499 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX1Q92499 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
DDX1Q92499 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX1Q92499 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX1Q92499 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX1Q92499 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX1Q92499 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX1Q92499 KRT8P39-201ENST00000396270 1433 ntBASIC17.88■□□□□ 0.45
DDX1Q92499 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX1Q92499 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DDX1Q92499 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
DDX1Q92499 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX1Q92499 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
DDX1Q92499 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
DDX1Q92499 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX1Q92499 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.87■□□□□ 0.45
DDX1Q92499 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
DDX1Q92499 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
DDX1Q92499 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DDX1Q92499 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX1Q92499 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX1Q92499 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.87■□□□□ 0.45
DDX1Q92499 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX1Q92499 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX1Q92499 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX1Q92499 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.87■□□□□ 0.45
DDX1Q92499 AC011467.4-201ENST00000594891 528 ntBASIC17.87■□□□□ 0.45
DDX1Q92499 CYP2A7P1-201ENST00000595391 815 ntBASIC17.87■□□□□ 0.45
DDX1Q92499 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
DDX1Q92499 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.87■□□□□ 0.45
DDX1Q92499 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 AL662844.4-201ENST00000606367 2838 ntBASIC17.87■□□□□ 0.45
DDX1Q92499 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX1Q92499 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 ME2P1-201ENST00000426028 1970 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 MRPL20P1-201ENST00000400819 433 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.86■□□□□ 0.45
DDX1Q92499 AC005412.3-201ENST00000580309 715 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 ACTL9-202ENST00000612068 1252 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.86■□□□□ 0.45
DDX1Q92499 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 GGT4P-201ENST00000623672 1708 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX1Q92499 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX1Q92499 AC005052.1-201ENST00000625181 2492 ntBASIC17.86■□□□□ 0.45
DDX1Q92499 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX1Q92499 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX1Q92499 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX1Q92499 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX1Q92499 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
DDX1Q92499 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX1Q92499 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms