Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 AC026120.1-201ENST00000611536 926 ntBASIC23.35■■□□□ 1.33
TMC1Q8TDI8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMC1Q8TDI8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 AC106028.4-201ENST00000614509 607 ntBASIC23.34■■□□□ 1.33
TMC1Q8TDI8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 TOP3BP1-201ENST00000420768 1380 ntBASIC23.34■■□□□ 1.33
TMC1Q8TDI8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMC1Q8TDI8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 AL645939.2-201ENST00000427340 991 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 SPDYE11-202ENST00000450699 704 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 RFPL4AP1-201ENST00000530883 850 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 DUX4L17-201ENST00000557360 1267 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 SPDYE9P-201ENST00000570642 692 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 SPDYE10P-202ENST00000612005 668 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 SPDYE8P-202ENST00000612377 668 ntBASIC23.33■■□□□ 1.33
TMC1Q8TDI8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMC1Q8TDI8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TMC1Q8TDI8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TMC1Q8TDI8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TMC1Q8TDI8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TMC1Q8TDI8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC23.33■■□□□ 1.32
TMC1Q8TDI8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMC1Q8TDI8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms