Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 GPS2P2-201ENST00000430745 888 ntBASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 AC109635.5-201ENST00000533593 962 ntBASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHKBP1Q8TBC3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 HCG4-201ENST00000418983 998 ntBASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 AC092474.2-201ENST00000424288 719 ntBASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 DUX4L27-201ENST00000554796 1261 ntBASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 LINC01225-203ENST00000563550 1244 ntBASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 AL390955.2-201ENST00000603032 514 ntBASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 CICP6-201ENST00000457191 2729 ntBASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.61■□□□□ 0.41
SHKBP1Q8TBC3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 AC093525.9-201ENST00000624961 1746 ntBASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms