Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 BCAR1-209ENST00000546196 1340 ntBASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDND2Q8NHS1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AL078644.1-201ENST00000609881 752 ntBASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 C20orf181-201ENST00000623918 480 ntBASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDND2Q8NHS1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 AL355312.1-201ENST00000407115 2176 ntBASIC14.33□□□□□ -0.11
CLDND2Q8NHS1 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 YBX1P5-201ENST00000509441 847 ntBASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 KRT19P2-202ENST00000557173 1012 ntBASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 PDPK2P-202ENST00000562415 1191 ntBASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 MIR4469-201ENST00000583919 79 ntBASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms