Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CRYGEP-201ENST00000412192 528 ntBASIC5.23□□□□□ -1.57
SYNE1Q8NF91 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 INO80C-206ENST00000586489 594 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SYNE1Q8NF91 CEND1P1-201ENST00000451006 455 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 STK25P1-201ENST00000585406 838 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PON3-203ENST00000427422 894 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ETFA-208ENST00000559602 792 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC092902.6-201ENST00000641783 218 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC004461.1-201ENST00000412461 403 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 FAM185BP-201ENST00000443595 716 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 AC005498.2-205ENST00000593218 784 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 DUX4L27-201ENST00000554796 1261 ntBASIC5.22□□□□□ -1.57
SYNE1Q8NF91 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNE1Q8NF91 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms