Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 ALG1L5P-201ENST00000482043 771 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AC112482.1-201ENST00000492080 688 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AC005829.1-201ENST00000570002 483 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AL161645.1-201ENST00000622716 1255 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AC006538.1-201ENST00000567905 1585 ntBASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAM1L1Q8N609 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 AC092902.6-201ENST00000641783 218 ntBASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAM1L1Q8N609 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 LTB4R2-202ENST00000528054 3092 ntBASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 AC099522.2-201ENST00000607001 744 ntBASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAM1L1Q8N609 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms