Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.25■□□□□ 0.35
ATPAF2Q8N5M1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.25■□□□□ 0.35
ATPAF2Q8N5M1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF2Q8N5M1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ATPAF2Q8N5M1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF2Q8N5M1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATPAF2Q8N5M1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 RPL13AP23-201ENST00000480739 586 ntBASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 CXCL1P1-201ENST00000502804 216 ntBASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 BX640515.1-201ENST00000617215 977 ntBASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 AP001350.2-201ENST00000625104 1094 ntBASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF2Q8N5M1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 HCG4-201ENST00000418983 998 ntBASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 FAM185BP-201ENST00000443595 716 ntBASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC087641.1-201ENST00000557561 1021 ntBASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC034105.1-201ENST00000563488 319 ntBASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 MIR4492-201ENST00000581627 80 ntBASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 ACTL9-202ENST00000612068 1252 ntBASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF2Q8N5M1 HLA-A-202ENST00000376806 1854 ntBASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 IGLL3P-201ENST00000412472 434 ntBASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF2Q8N5M1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms