Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.41■□□□□ 0.38
SCML4Q8N228 GGT4P-201ENST00000623672 1708 ntBASIC17.41■□□□□ 0.38
SCML4Q8N228 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCML4Q8N228 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCML4Q8N228 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SCML4Q8N228 AD000864.1-201ENST00000624076 2295 ntBASIC17.4■□□□□ 0.38
SCML4Q8N228 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.4■□□□□ 0.38
SCML4Q8N228 AC016027.1-202ENST00000607927 1699 ntBASIC17.4■□□□□ 0.38
SCML4Q8N228 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.4■□□□□ 0.38
SCML4Q8N228 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.4■□□□□ 0.38
SCML4Q8N228 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 AC004967.1-201ENST00000453589 447 ntBASIC17.4■□□□□ 0.38
SCML4Q8N228 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.4■□□□□ 0.38
SCML4Q8N228 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SCML4Q8N228 AC243562.1-201ENST00000560672 389 ntBASIC17.4■□□□□ 0.38
SCML4Q8N228 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.4■□□□□ 0.38
SCML4Q8N228 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.4■□□□□ 0.38
SCML4Q8N228 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
SCML4Q8N228 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCML4Q8N228 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCML4Q8N228 AC106886.4-201ENST00000623557 2502 ntBASIC17.4■□□□□ 0.38
SCML4Q8N228 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SCML4Q8N228 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.39■□□□□ 0.37
SCML4Q8N228 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.39■□□□□ 0.37
SCML4Q8N228 AC084121.4-201ENST00000641598 221 ntBASIC17.39■□□□□ 0.37
SCML4Q8N228 AC134684.3-201ENST00000641758 218 ntBASIC17.39■□□□□ 0.37
SCML4Q8N228 AF228730.8-201ENST00000642140 221 ntBASIC17.39■□□□□ 0.37
SCML4Q8N228 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.37
SCML4Q8N228 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 AC009053.2-201ENST00000563701 2365 ntBASIC17.39■□□□□ 0.37
SCML4Q8N228 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCML4Q8N228 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCML4Q8N228 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SCML4Q8N228 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.39■□□□□ 0.37
SCML4Q8N228 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.38■□□□□ 0.37
SCML4Q8N228 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms