Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 KRT8P39-201ENST00000396270 1433 ntBASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 HNRNPDP1-201ENST00000439535 754 ntBASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 AC107918.2-201ENST00000530817 355 ntBASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 FAM215A-202ENST00000632077 792 ntBASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 AC093909.1-201ENST00000504731 1122 ntBASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 KRT126P-201ENST00000549467 1181 ntBASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 AC099398.1-201ENST00000567919 2776 ntBASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF440Q8IYI8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 FER1L4-210ENST00000615531 5998 ntBASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 AP002414.3-201ENST00000589352 1468 ntBASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 AC079781.3-201ENST00000449110 356 ntBASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF440Q8IYI8 AL160237.2-201ENST00000556165 472 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms