Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NPAS4Q8IUM7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AC009407.1-201ENST00000568958 598 ntBASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AC105021.1-202ENST00000570572 669 ntBASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AL844908.2-201ENST00000609461 460 ntBASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AC008738.7-201ENST00000609744 511 ntBASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS4Q8IUM7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 NEFHP1-201ENST00000412845 2629 ntBASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 RPL37AP1-201ENST00000412502 279 ntBASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 RNA5SP410-201ENST00000516285 106 ntBASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS4Q8IUM7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms