Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 AC244093.1-201ENST00000610837 814 ntBASIC20.81■□□□□ 0.92
COL23A1Q86Y22 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.81■□□□□ 0.92
COL23A1Q86Y22 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 CTBP2P5-201ENST00000454986 1264 ntBASIC20.8■□□□□ 0.92
COL23A1Q86Y22 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 AC018665.1-201ENST00000622927 1362 ntBASIC20.8■□□□□ 0.92
COL23A1Q86Y22 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.8■□□□□ 0.92
COL23A1Q86Y22 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 PDIA3P1-201ENST00000471856 1510 ntBASIC20.79■□□□□ 0.92
COL23A1Q86Y22 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 RRP7BP-205ENST00000566851 833 ntBASIC20.79■□□□□ 0.92
COL23A1Q86Y22 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL23A1Q86Y22 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AC099336.1-201ENST00000417053 1171 ntBASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AC092337.1-201ENST00000568699 1129 ntBASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.78■□□□□ 0.92
COL23A1Q86Y22 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL23A1Q86Y22 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms