Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 PMS2P2-201ENST00000425039 1128 ntBASIC17.83■□□□□ 0.44
TTC30AQ86WT1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 AL513480.1-201ENST00000451731 511 ntBASIC17.83■□□□□ 0.44
TTC30AQ86WT1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 AC006277.1-201ENST00000624348 1610 ntBASIC17.83■□□□□ 0.44
TTC30AQ86WT1 LINC00895-201ENST00000629028 1637 ntBASIC17.83■□□□□ 0.44
TTC30AQ86WT1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC30AQ86WT1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AC025580.3-201ENST00000617932 1424 ntBASIC17.82■□□□□ 0.44
TTC30AQ86WT1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AL391256.1-201ENST00000443260 1855 ntBASIC17.82■□□□□ 0.44
TTC30AQ86WT1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.82■□□□□ 0.44
TTC30AQ86WT1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 KRT19P2-202ENST00000557173 1012 ntBASIC17.82■□□□□ 0.44
TTC30AQ86WT1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AC013467.2-201ENST00000605472 835 ntBASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC30AQ86WT1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 AC211486.1-202ENST00000416371 468 ntBASIC17.81■□□□□ 0.44
TTC30AQ86WT1 AC211476.1-201ENST00000503899 468 ntBASIC17.81■□□□□ 0.44
TTC30AQ86WT1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 MTDHP5-201ENST00000598980 586 ntBASIC17.81■□□□□ 0.44
TTC30AQ86WT1 AC023141.13-201ENST00000604991 943 ntBASIC17.81■□□□□ 0.44
TTC30AQ86WT1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC30AQ86WT1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms