Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AL928711.1-201ENST00000570165 459 ntBASIC16.13■□□□□ 0.17
RNF44Q7L0R7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 AC131009.4-201ENST00000624048 1740 ntBASIC16.12■□□□□ 0.17
RNF44Q7L0R7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 AC074386.1-202ENST00000463561 864 ntBASIC16.12■□□□□ 0.17
RNF44Q7L0R7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 MIR4492-201ENST00000581627 80 ntBASIC16.12■□□□□ 0.17
RNF44Q7L0R7 MTDHP5-201ENST00000598980 586 ntBASIC16.12■□□□□ 0.17
RNF44Q7L0R7 AC068137.2-201ENST00000605408 478 ntBASIC16.12■□□□□ 0.17
RNF44Q7L0R7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF44Q7L0R7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 AC012569.1-201ENST00000591191 1524 ntBASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 AC092865.5-201ENST00000545435 363 ntBASIC16.11■□□□□ 0.17
RNF44Q7L0R7 AC087641.1-201ENST00000557561 1021 ntBASIC16.11■□□□□ 0.17
RNF44Q7L0R7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF44Q7L0R7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 LINC00895-201ENST00000629028 1637 ntBASIC16.1■□□□□ 0.17
RNF44Q7L0R7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms