Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.92■□□□□ 0.78
CTR9Q6PD62 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 AP000344.2-201ENST00000512987 629 ntBASIC19.92■□□□□ 0.78
CTR9Q6PD62 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.92■□□□□ 0.78
CTR9Q6PD62 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 AL645728.1-201ENST00000366221 2101 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 LINC00895-201ENST00000629028 1637 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 SNX33P1-201ENST00000592116 1762 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 PMS2P4-201ENST00000412466 1052 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 AC243562.1-201ENST00000560672 389 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 MIR3909-201ENST00000579518 119 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 AC027612.4-201ENST00000605371 583 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 AC026120.1-201ENST00000611536 926 ntBASIC19.91■□□□□ 0.78
CTR9Q6PD62 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTR9Q6PD62 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTR9Q6PD62 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 TFAMP1-201ENST00000412727 736 ntBASIC19.9■□□□□ 0.78
CTR9Q6PD62 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 RARRES2P8-201ENST00000566335 367 ntBASIC19.9■□□□□ 0.78
CTR9Q6PD62 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 AL161645.1-201ENST00000622716 1255 ntBASIC19.9■□□□□ 0.78
CTR9Q6PD62 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.9■□□□□ 0.78
CTR9Q6PD62 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTR9Q6PD62 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CTR9Q6PD62 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CTR9Q6PD62 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.89■□□□□ 0.77
CTR9Q6PD62 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms