Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 AC096734.2-201ENST00000562054 433 ntBASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 AC034105.1-201ENST00000563488 319 ntBASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 REXO1L3P-201ENST00000622202 1288 ntBASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 AC007064.4-201ENST00000637740 555 ntBASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC144NLQ6NUI1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AC092068.3-201ENST00000587894 2016 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 PMS2P1-201ENST00000431037 1228 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 FAM185BP-201ENST00000443595 716 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 HCG4B-203ENST00000450128 991 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 KRT18P58-201ENST00000527480 1120 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 DUX4L17-201ENST00000557360 1267 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AL645728.2-201ENST00000641974 660 ntBASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCDC144NLQ6NUI1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCDC144NLQ6NUI1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CCDC144NLQ6NUI1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 AC060834.1-201ENST00000443027 2032 ntBASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC144NLQ6NUI1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms