Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 SLC25A1P3-201ENST00000395415 828 ntBASIC17.66■□□□□ 0.42
RNF43Q68DV7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF43Q68DV7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RNF43Q68DV7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 MRPL20P1-201ENST00000400819 433 ntBASIC17.65■□□□□ 0.42
RNF43Q68DV7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 AC254562.1-201ENST00000417586 456 ntBASIC17.65■□□□□ 0.42
RNF43Q68DV7 MCCD1P2-201ENST00000423228 335 ntBASIC17.65■□□□□ 0.42
RNF43Q68DV7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 AL645939.2-201ENST00000427340 991 ntBASIC17.65■□□□□ 0.42
RNF43Q68DV7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 AC011467.4-201ENST00000594891 528 ntBASIC17.65■□□□□ 0.42
RNF43Q68DV7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF43Q68DV7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF43Q68DV7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF43Q68DV7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF43Q68DV7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF43Q68DV7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF43Q68DV7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.64■□□□□ 0.41
RNF43Q68DV7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 MIR4469-201ENST00000583919 79 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms