Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 AC117500.6-201ENST00000624871 588 ntBASIC18.41■□□□□ 0.54
COBLL1Q53SF7 AL662844.4-201ENST00000606367 2838 ntBASIC18.41■□□□□ 0.54
COBLL1Q53SF7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 PCGF3-213ENST00000620529 1899 ntBASIC18.41■□□□□ 0.54
COBLL1Q53SF7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COBLL1Q53SF7 AC022188.1-201ENST00000620960 1664 ntBASIC18.41■□□□□ 0.54
COBLL1Q53SF7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 MIR3909-201ENST00000579518 119 ntBASIC18.4■□□□□ 0.54
COBLL1Q53SF7 RN7SL510P-201ENST00000581311 263 ntBASIC18.4■□□□□ 0.54
COBLL1Q53SF7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 AC004790.2-201ENST00000623588 572 ntBASIC18.4■□□□□ 0.54
COBLL1Q53SF7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COBLL1Q53SF7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 OR6D1P-202ENST00000641007 5290 ntBASIC18.39■□□□□ 0.54
COBLL1Q53SF7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COBLL1Q53SF7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 AP002469.2-201ENST00000531724 424 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 MIR4515-201ENST00000584082 81 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 AC020765.3-201ENST00000613051 740 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 MIR7706-201ENST00000613747 67 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 AL031008.1-201ENST00000619963 541 ntBASIC18.39■□□□□ 0.53
COBLL1Q53SF7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COBLL1Q53SF7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms