Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6AP1LQ52LC2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 AC243591.1-201ENST00000452967 1364 ntBASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 NUS1P2-201ENST00000417358 873 ntBASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 MIR5100-201ENST00000579544 119 ntBASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 MIR3180-1-201ENST00000580374 94 ntBASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 MIR3180-3-201ENST00000584616 94 ntBASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 AL590326.2-201ENST00000625139 305 ntBASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATP6AP1LQ52LC2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 PCDHA1-201ENST00000378133 2726 ntBASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 AC069148.1-201ENST00000608741 768 ntBASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 AP000550.4-202ENST00000639755 178 ntBASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6AP1LQ52LC2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms