Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 HMGA1P7-201ENST00000406908 502 ntBASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTC1Q2NKJ3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 AC241585.1-201ENST00000433527 519 ntBASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 AL009183.1-201ENST00000603760 355 ntBASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTC1Q2NKJ3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 RN7SL692P-201ENST00000464677 288 ntBASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 ALG1L8P-201ENST00000533887 760 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms