Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 ME2P1-201ENST00000426028 1970 ntBASIC15.67■□□□□ 0.1
CD47Q08722 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 AL136379.1-201ENST00000623471 2642 ntBASIC15.67■□□□□ 0.1
CD47Q08722 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 AC006538.1-201ENST00000567905 1585 ntBASIC15.67■□□□□ 0.1
CD47Q08722 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 MYCLP1-201ENST00000372451 1075 ntBASIC15.67■□□□□ 0.1
CD47Q08722 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
CD47Q08722 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.67■□□□□ 0.1
CD47Q08722 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.67■□□□□ 0.1
CD47Q08722 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.67■□□□□ 0.1
CD47Q08722 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.67■□□□□ 0.1
CD47Q08722 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CD47Q08722 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.67■□□□□ 0.1
CD47Q08722 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD47Q08722 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.66■□□□□ 0.1
CD47Q08722 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CD47Q08722 CHCHD2P8-201ENST00000429873 447 ntBASIC15.66■□□□□ 0.1
CD47Q08722 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.66■□□□□ 0.1
CD47Q08722 FAM86EP-206ENST00000510506 987 ntBASIC15.66■□□□□ 0.1
CD47Q08722 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.66■□□□□ 0.1
CD47Q08722 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.66■□□□□ 0.1
CD47Q08722 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.66■□□□□ 0.1
CD47Q08722 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.66■□□□□ 0.1
CD47Q08722 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD47Q08722 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD47Q08722 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.65■□□□□ 0.1
CD47Q08722 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.65■□□□□ 0.1
CD47Q08722 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD47Q08722 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD47Q08722 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms