Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-1P78426 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-1P78426 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX6-1P78426 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX6-1P78426 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX6-1P78426 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
NKX6-1P78426 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX6-1P78426 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 AL805961.1-202ENST00000641562 540 ntBASIC14.87□□□□□ -0.03
NKX6-1P78426 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 LINC00896-202ENST00000609602 2128 ntBASIC14.87□□□□□ -0.03
NKX6-1P78426 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX6-1P78426 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NKX6-1P78426 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-1P78426 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-1P78426 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX6-1P78426 AC068587.6-202ENST00000641839 5619 ntBASIC14.86□□□□□ -0.03
NKX6-1P78426 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NKX6-1P78426 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NKX6-1P78426 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-1P78426 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-1P78426 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX6-1P78426 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NKX6-1P78426 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 AL035633.1-201ENST00000406139 838 ntBASIC14.86□□□□□ -0.03
NKX6-1P78426 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NKX6-1P78426 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX6-1P78426 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 PRSS29P-201ENST00000440800 595 ntBASIC14.86□□□□□ -0.03
NKX6-1P78426 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX6-1P78426 HCG4B-203ENST00000450128 991 ntBASIC14.86□□□□□ -0.03
NKX6-1P78426 RPS15P9-201ENST00000494093 319 ntBASIC14.86□□□□□ -0.03
NKX6-1P78426 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX6-1P78426 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX6-1P78426 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.86□□□□□ -0.03
NKX6-1P78426 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX6-1P78426 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
NKX6-1P78426 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-1P78426 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX6-1P78426 AL590787.1-201ENST00000568856 1315 ntBASIC14.86□□□□□ -0.03
NKX6-1P78426 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-1P78426 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX6-1P78426 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NKX6-1P78426 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX6-1P78426 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-1P78426 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-1P78426 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NKX6-1P78426 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms