Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 AC236430.1-201ENST00000402231 743 ntBASIC19.57■□□□□ 0.72
IRX3P78415 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.57■□□□□ 0.72
IRX3P78415 TREML5P-201ENST00000421694 576 ntBASIC19.57■□□□□ 0.72
IRX3P78415 SPDYE14P-201ENST00000442619 822 ntBASIC19.57■□□□□ 0.72
IRX3P78415 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IRX3P78415 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.57■□□□□ 0.72
IRX3P78415 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.57■□□□□ 0.72
IRX3P78415 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.57■□□□□ 0.72
IRX3P78415 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IRX3P78415 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
IRX3P78415 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 TSPY16P-201ENST00000449843 468 ntBASIC19.56■□□□□ 0.72
IRX3P78415 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.56■□□□□ 0.72
IRX3P78415 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.56■□□□□ 0.72
IRX3P78415 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
IRX3P78415 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 MIR6080-201ENST00000617359 66 ntBASIC19.56■□□□□ 0.72
IRX3P78415 AL390754.1-201ENST00000619088 582 ntBASIC19.56■□□□□ 0.72
IRX3P78415 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
IRX3P78415 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.56■□□□□ 0.72
IRX3P78415 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.56■□□□□ 0.72
IRX3P78415 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
IRX3P78415 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
IRX3P78415 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX3P78415 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IRX3P78415 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IRX3P78415 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.55■□□□□ 0.72
IRX3P78415 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IRX3P78415 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
IRX3P78415 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX3P78415 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.55■□□□□ 0.72
IRX3P78415 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 AC002472.2-201ENST00000442739 958 ntBASIC19.55■□□□□ 0.72
IRX3P78415 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX3P78415 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.55■□□□□ 0.72
IRX3P78415 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.55■□□□□ 0.72
IRX3P78415 SLC25A39P2-201ENST00000537614 270 ntBASIC19.55■□□□□ 0.72
IRX3P78415 AC087641.1-201ENST00000557561 1021 ntBASIC19.55■□□□□ 0.72
IRX3P78415 AL031055.1-201ENST00000606362 631 ntBASIC19.55■□□□□ 0.72
IRX3P78415 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.55■□□□□ 0.72
IRX3P78415 AF228730.6-201ENST00000641497 218 ntBASIC19.55■□□□□ 0.72
IRX3P78415 AC084121.3-201ENST00000641716 218 ntBASIC19.55■□□□□ 0.72
IRX3P78415 AC105233.6-201ENST00000642093 218 ntBASIC19.55■□□□□ 0.72
IRX3P78415 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX3P78415 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX3P78415 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.54■□□□□ 0.72
IRX3P78415 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.54■□□□□ 0.72
IRX3P78415 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
IRX3P78415 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms