Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.43□□□□□ -0.1
ABCA4P78363 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA4P78363 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
ABCA4P78363 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA4P78363 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.43□□□□□ -0.1
ABCA4P78363 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 AC069120.2-201ENST00000524091 540 ntBASIC14.43□□□□□ -0.1
ABCA4P78363 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ABCA4P78363 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA4P78363 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA4P78363 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA4P78363 AC027307.2-201ENST00000591252 911 ntBASIC14.43□□□□□ -0.1
ABCA4P78363 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA4P78363 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
ABCA4P78363 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ABCA4P78363 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 ACA64.2-201ENST00000459014 129 ntBASIC14.42□□□□□ -0.1
ABCA4P78363 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCA4P78363 FO538757.1-201ENST00000623083 1397 ntBASIC14.42□□□□□ -0.1
ABCA4P78363 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ABCA4P78363 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCA4P78363 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ABCA4P78363 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA4P78363 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCA4P78363 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCA4P78363 ALG1L8P-201ENST00000533887 760 ntBASIC14.41□□□□□ -0.1
ABCA4P78363 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCA4P78363 MIR4492-201ENST00000581627 80 ntBASIC14.41□□□□□ -0.1
ABCA4P78363 AL031055.1-201ENST00000606362 631 ntBASIC14.41□□□□□ -0.1
ABCA4P78363 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCA4P78363 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ABCA4P78363 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ABCA4P78363 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ABCA4P78363 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ABCA4P78363 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
ABCA4P78363 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCA4P78363 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCA4P78363 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCA4P78363 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ABCA4P78363 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCA4P78363 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms