Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.89■□□□□ 0.29
AP1S1P61966 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 AC023511.2-201ENST00000618803 211 ntBASIC16.89■□□□□ 0.29
AP1S1P61966 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AP1S1P61966 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
AP1S1P61966 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
AP1S1P61966 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP1S1P61966 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
AP1S1P61966 AC006538.1-201ENST00000567905 1585 ntBASIC16.89■□□□□ 0.29
AP1S1P61966 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AP1S1P61966 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP1S1P61966 AL671710.1-201ENST00000610245 2349 ntBASIC16.88■□□□□ 0.29
AP1S1P61966 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
AP1S1P61966 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP1S1P61966 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
AP1S1P61966 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
AP1S1P61966 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
AP1S1P61966 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 UPF3AP3-201ENST00000420996 769 ntBASIC16.88■□□□□ 0.29
AP1S1P61966 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ACTG1P14-201ENST00000446382 1122 ntBASIC16.88■□□□□ 0.29
AP1S1P61966 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.88■□□□□ 0.29
AP1S1P61966 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.88■□□□□ 0.29
AP1S1P61966 AL078644.1-201ENST00000609881 752 ntBASIC16.88■□□□□ 0.29
AP1S1P61966 AL161645.1-201ENST00000622716 1255 ntBASIC16.88■□□□□ 0.29
AP1S1P61966 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
AP1S1P61966 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP1S1P61966 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
AP1S1P61966 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP1S1P61966 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP1S1P61966 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP1S1P61966 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
AP1S1P61966 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.87■□□□□ 0.29
AP1S1P61966 AC092474.2-201ENST00000424288 719 ntBASIC16.87■□□□□ 0.29
AP1S1P61966 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.87■□□□□ 0.29
AP1S1P61966 HTR5BP-201ENST00000430851 1154 ntBASIC16.87■□□□□ 0.29
AP1S1P61966 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.87■□□□□ 0.29
AP1S1P61966 ALG1L5P-201ENST00000482043 771 ntBASIC16.87■□□□□ 0.29
AP1S1P61966 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
AP1S1P61966 AC005829.1-201ENST00000570002 483 ntBASIC16.87■□□□□ 0.29
AP1S1P61966 AC010327.4-202ENST00000591484 748 ntBASIC16.87■□□□□ 0.29
AP1S1P61966 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.87■□□□□ 0.29
AP1S1P61966 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP1S1P61966 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms