Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
CMC4P56277 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
CMC4P56277 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.51□□□□□ -0.41
CMC4P56277 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.51□□□□□ -0.41
CMC4P56277 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CMC4P56277 IGLL3P-201ENST00000412472 434 ntBASIC12.51□□□□□ -0.41
CMC4P56277 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.51□□□□□ -0.41
CMC4P56277 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 AC004832.2-201ENST00000426397 482 ntBASIC12.51□□□□□ -0.41
CMC4P56277 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 FAM86C2P-203ENST00000528684 1004 ntBASIC12.51□□□□□ -0.41
CMC4P56277 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.51□□□□□ -0.41
CMC4P56277 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.51□□□□□ -0.41
CMC4P56277 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.51□□□□□ -0.41
CMC4P56277 KRT19P2-202ENST00000557173 1012 ntBASIC12.51□□□□□ -0.41
CMC4P56277 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.51□□□□□ -0.41
CMC4P56277 PDPK2P-202ENST00000562415 1191 ntBASIC12.51□□□□□ -0.41
CMC4P56277 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.51□□□□□ -0.41
CMC4P56277 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.51□□□□□ -0.41
CMC4P56277 CYP2A7P1-201ENST00000595391 815 ntBASIC12.51□□□□□ -0.41
CMC4P56277 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.51□□□□□ -0.41
CMC4P56277 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CMC4P56277 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CMC4P56277 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CMC4P56277 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.51□□□□□ -0.41
CMC4P56277 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.51□□□□□ -0.41
CMC4P56277 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CMC4P56277 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CMC4P56277 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CMC4P56277 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 MCCD1P2-201ENST00000423228 335 ntBASIC12.5□□□□□ -0.41
CMC4P56277 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CMC4P56277 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CMC4P56277 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.5□□□□□ -0.41
CMC4P56277 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.5□□□□□ -0.41
CMC4P56277 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.5□□□□□ -0.41
CMC4P56277 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 AC068137.2-201ENST00000605408 478 ntBASIC12.5□□□□□ -0.41
CMC4P56277 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.5□□□□□ -0.41
CMC4P56277 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 KRT8P39-201ENST00000396270 1433 ntBASIC12.5□□□□□ -0.41
CMC4P56277 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CMC4P56277 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 AL391256.1-201ENST00000443260 1855 ntBASIC12.5□□□□□ -0.41
CMC4P56277 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CMC4P56277 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CMC4P56277 PP12613-201ENST00000424958 2230 ntBASIC12.5□□□□□ -0.41
CMC4P56277 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms