Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.68■□□□□ 0.58
LBX1P52954 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 KRT90P-201ENST00000549264 1064 ntBASIC18.68■□□□□ 0.58
LBX1P52954 EEF1DP1-201ENST00000585891 896 ntBASIC18.68■□□□□ 0.58
LBX1P52954 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 AC026979.3-201ENST00000607315 403 ntBASIC18.68■□□□□ 0.58
LBX1P52954 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.68■□□□□ 0.58
LBX1P52954 AC091812.3-201ENST00000621362 345 ntBASIC18.68■□□□□ 0.58
LBX1P52954 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.68■□□□□ 0.58
LBX1P52954 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LBX1P52954 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.68■□□□□ 0.58
LBX1P52954 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
LBX1P52954 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LBX1P52954 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LBX1P52954 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
LBX1P52954 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LBX1P52954 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LBX1P52954 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.67■□□□□ 0.58
LBX1P52954 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LBX1P52954 RN7SL720P-201ENST00000488178 304 ntBASIC18.67■□□□□ 0.58
LBX1P52954 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.67■□□□□ 0.58
LBX1P52954 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.67■□□□□ 0.58
LBX1P52954 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.67■□□□□ 0.58
LBX1P52954 AC023310.1-201ENST00000554836 735 ntBASIC18.67■□□□□ 0.58
LBX1P52954 AC036164.1-201ENST00000570544 333 ntBASIC18.67■□□□□ 0.58
LBX1P52954 AL353726.2-201ENST00000623259 884 ntBASIC18.67■□□□□ 0.58
LBX1P52954 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.67■□□□□ 0.58
LBX1P52954 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LBX1P52954 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LBX1P52954 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
LBX1P52954 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.66■□□□□ 0.58
LBX1P52954 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.66■□□□□ 0.58
LBX1P52954 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.66■□□□□ 0.58
LBX1P52954 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.66■□□□□ 0.58
LBX1P52954 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.66■□□□□ 0.58
LBX1P52954 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.66■□□□□ 0.58
LBX1P52954 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.66■□□□□ 0.58
LBX1P52954 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
LBX1P52954 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LBX1P52954 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LBX1P52954 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.65■□□□□ 0.58
LBX1P52954 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.65■□□□□ 0.58
LBX1P52954 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
LBX1P52954 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LBX1P52954 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.65■□□□□ 0.58
LBX1P52954 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LBX1P52954 BAATP1-201ENST00000412284 1225 ntBASIC18.65■□□□□ 0.58
LBX1P52954 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.65■□□□□ 0.58
LBX1P52954 SOCS2P1-201ENST00000417727 557 ntBASIC18.65■□□□□ 0.58
LBX1P52954 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.65■□□□□ 0.58
LBX1P52954 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.65■□□□□ 0.58
LBX1P52954 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.65■□□□□ 0.58
LBX1P52954 ENPP7P5-201ENST00000541031 1031 ntBASIC18.65■□□□□ 0.58
LBX1P52954 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.65■□□□□ 0.58
LBX1P52954 AC005702.4-201ENST00000618393 416 ntBASIC18.65■□□□□ 0.58
LBX1P52954 CU633904.3-201ENST00000624042 1029 ntBASIC18.65■□□□□ 0.58
LBX1P52954 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.65■□□□□ 0.58
LBX1P52954 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.65■□□□□ 0.58
LBX1P52954 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
LBX1P52954 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LBX1P52954 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
LBX1P52954 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms