Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HMGCLP35914 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGCLP35914 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCLP35914 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCLP35914 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCLP35914 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCLP35914 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 MIR940-201ENST00000401276 94 ntBASIC16.71■□□□□ 0.27
HMGCLP35914 PMS2P4-201ENST00000412466 1052 ntBASIC16.71■□□□□ 0.27
HMGCLP35914 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGCLP35914 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGCLP35914 AC074386.1-202ENST00000463561 864 ntBASIC16.71■□□□□ 0.27
HMGCLP35914 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGCLP35914 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGCLP35914 POLD2P1-201ENST00000511220 997 ntBASIC16.71■□□□□ 0.27
HMGCLP35914 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGCLP35914 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.71■□□□□ 0.27
HMGCLP35914 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.71■□□□□ 0.27
HMGCLP35914 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.71■□□□□ 0.27
HMGCLP35914 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGCLP35914 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.71■□□□□ 0.27
HMGCLP35914 AL513190.1-201ENST00000621254 727 ntBASIC16.71■□□□□ 0.27
HMGCLP35914 AC092865.6-201ENST00000642101 219 ntBASIC16.71■□□□□ 0.27
HMGCLP35914 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGCLP35914 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGCLP35914 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HMGCLP35914 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCLP35914 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 PMS2P7-201ENST00000506558 1336 ntBASIC16.7■□□□□ 0.26
HMGCLP35914 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGCLP35914 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HMGCLP35914 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HMGCLP35914 AC092171.3-201ENST00000610122 2651 ntBASIC16.7■□□□□ 0.26
HMGCLP35914 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGCLP35914 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 AC140658.5-201ENST00000438532 169 ntBASIC16.7■□□□□ 0.26
HMGCLP35914 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGCLP35914 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGCLP35914 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
HMGCLP35914 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HMGCLP35914 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCLP35914 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCLP35914 UBALD1-205ENST00000590891 2641 ntBASIC16.69■□□□□ 0.26
HMGCLP35914 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGCLP35914 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.69■□□□□ 0.26
HMGCLP35914 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGCLP35914 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGCLP35914 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
HMGCLP35914 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 AC109635.5-201ENST00000533593 962 ntBASIC16.69■□□□□ 0.26
HMGCLP35914 AL031055.1-201ENST00000606362 631 ntBASIC16.69■□□□□ 0.26
HMGCLP35914 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGCLP35914 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGCLP35914 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGCLP35914 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms